Edit Profile (opens in new tab) Sidje, Roger B. Compute Distance To: Compute Author ID: sidje.roger-b Published as: Sidje, Roger B.; Sidje, R. B.; Sidje, Roger Documents Indexed: 33 Publications since 1995 1 Contribution as Editor Co-Authors: 23 Co-Authors with 30 Joint Publications 425 Co-Co-Authors all top 5 Co-Authors 4 single-authored 9 Burrage, Kevin 6 Hoang, Nguyen Si 3 MacNamara, Shev F. 3 Sadkane, Miloud 3 Vo, Huy D. 2 Cong, Nguyen Huu 2 Philippe, Bernard J. 2 Saad, Yousef 1 Altas, Irfan 1 Bertalan, Tom S. 1 Carlson, Eric S. 1 Christen, Peter 1 Dinh, Khanh N. 1 Eldershaw, Craig 1 Hegland, Markus 1 Islam, Akand W. 1 Nguyen, Hoang Si 1 Reid, Brandon M. 1 Roberts, Stephen Gwyn 1 Sheehan, Bernard N. 1 Stewart, William J. 1 Williams, Alan B. 1 Winkles, Nathan all top 5 Serials 4 BIT 4 Numerical Linear Algebra with Applications 4 The ANZIAM Journal 3 Journal of Computational and Applied Mathematics 3 Numerical Algorithms 2 Mathematical Biosciences 1 ACM Transactions on Mathematical Software 1 Applied Mathematics and Computation 1 Mathematics and Computers in Simulation 1 Numerische Mathematik 1 Applied Numerical Mathematics 1 Applied Mathematics Letters 1 SIAM Journal on Matrix Analysis and Applications 1 Computational Statistics and Data Analysis 1 SIAM Journal on Scientific Computing 1 ETNA. Electronic Transactions on Numerical Analysis 1 Multiscale Modeling & Simulation all top 5 Fields 30 Numerical analysis (65-XX) 6 Ordinary differential equations (34-XX) 5 Probability theory and stochastic processes (60-XX) 4 Linear and multilinear algebra; matrix theory (15-XX) 4 Biology and other natural sciences (92-XX) 2 Fluid mechanics (76-XX) 1 General and overarching topics; collections (00-XX) 1 Special functions (33-XX) 1 Approximations and expansions (41-XX) 1 Calculus of variations and optimal control; optimization (49-XX) 1 Statistics (62-XX) 1 Computer science (68-XX) 1 Mechanics of deformable solids (74-XX) 1 Classical thermodynamics, heat transfer (80-XX) 1 Quantum theory (81-XX) Publications by Year all cited Publications top 5 cited Publications Citations contained in zbMATH Open 29 Publications have been cited 350 times in 298 Documents Cited by ▼ Year ▼ Expokit: A software package for computing matrix exponentials. Zbl 0917.65063Sidje, Roger B. 195 1998 Multiscale modeling of chemical kinetics via the master equation. Zbl 1153.60370Macnamara, Shev; Burrage, Kevin; Sidje, Roger B. 28 2008 Analysis of trigonometric implicit Runge-Kutta methods. Zbl 1106.65063Nguyen, Hoang Si; Sidje, Roger B.; Cong, Nguyen Huu 25 2007 A numerical study of large sparse matrix exponentials arising in Markov chains. Zbl 1042.65508Sidje, Roger B.; Stewart, William J. 18 1999 Inexact uniformization method for computing transient distributions of Markov chains. Zbl 1154.65300Sidje, Roger B.; Burrage, Kevin; Macnamara, Shev 15 2007 On functionally-fitted Runge-Kutta methods. Zbl 1108.65076Hoang, Nguyen Si; Sidje, Roger B.; Cong, Nguyen Huu 12 2006 Approximating the large sparse matrix exponential using incomplete orthogonalization and Krylov subspaces of variable dimension. Zbl 1424.65063Vo, Huy D.; Sidje, Roger B. 7 2017 Solving the chemical master equation by a fast adaptive finite state projection based on the stochastic simulation algorithm. Zbl 1351.92018Sidje, R. B.; Vo, H. D. 6 2015 Implementation of a variable block Davidson method with deflation for solving large sparse eigenproblems. Zbl 0940.65039Sadkane, Miloud; Sidje, Roger B. 4 1999 Computing \(exp(-\tau A) b\) with Laguerre polynomials. Zbl 1205.65165Sheehan, Bernard N.; Saad, Yousef; Sidje, Roger B. 4 2010 On the simultaneous tridiagonalization of two symmetric matrices. Zbl 1221.65107Sidje, Roger B. 3 2011 Evaluation of the performance of inexact GMRES. Zbl 1209.65040Sidje, Roger B.; Winkles, Nathan 3 2011 Rational approximation to the Fermi-Dirac function with applications in density functional theory. Zbl 1211.65026Sidje, Roger B.; Saad, Yousef 3 2011 On the stability of functionally fitted Runge-Kutta methods. Zbl 1143.65066Hoang, Nguyen Si; Sidje, Roger B. 3 2008 Fast generalized cross validation using Krylov subspace methods. Zbl 1157.65012Sidje, Roger B.; Williams, Alan B.; Burrage, Kevin 3 2008 Functionally fitted Runge-Kutta-Nyström methods. Zbl 1359.65114Hoang, N. S.; Sidje, Roger B. 3 2016 Inexact uniformization and GMRES methods for large Markov chains. Zbl 1265.65011Sidje, R. B. 2 2011 QRT: A QR-based tridiagonalization algorithm for nonsymmetric matrices. Zbl 1081.65040Sidje, Roger B.; Burrage, K. 2 2005 Alternatives for parallel Krylov subspace basis computation. Zbl 0889.65029Sidje, R. B. 2 1997 An improved finite state projection algorithm for the numerical solution of the chemical master equation with applications. Zbl 1334.92475MacNamara, Shev F.; Burrage, Kevin; Sidje, Roger B. 2 2007 Transient solutions of Markov processes by Krylov subspaces. Zbl 0862.60056Philippe, Bernard; Sidje, Roger B. 2 1995 A parallel matrix-free implementation of a Runge-Kutta code. Zbl 1193.65118Burrage, Kevin; Eldershaw, Craig; Sidje, Roger 1 1999 Functionally fitted explicit pseudo two-step Runge-Kutta methods. Zbl 1158.65050Hoang, Nguyen S.; Sidje, Roger B. 1 2009 Implementation of variable parameters in the Krylov-based finite state projection for solving the chemical master equation. Zbl 1411.65070Vo, H. D.; Sidje, R. B. 1 2017 On the equivalence of the continuous Adams-Bashforth method and Nordsieck’s technique for changing the step size. Zbl 1308.65120Hoang, N. S.; Sidje, R. B. 1 2013 Efficient computation of the spectral projections of regular matrix pairs. Zbl 1332.65060Sadkane, Miloud; Sidje, Roger B. 1 2016 On the stability function of functionally fitted Runge-Kutta methods. Zbl 1337.65078Sidje, Roger B.; Hoang, Nguyen S. 1 2007 Analysis of inexact Krylov subspace methods for approximating the matrix exponential. Zbl 07313838Dinh, Khanh N.; Sidje, Roger B. 1 2017 An alternating maximization method for approximating the hump of the matrix exponential. Zbl 1378.65097Sadkane, Miloud; Sidje, Roger B. 1 2017 Approximating the large sparse matrix exponential using incomplete orthogonalization and Krylov subspaces of variable dimension. Zbl 1424.65063Vo, Huy D.; Sidje, Roger B. 7 2017 Implementation of variable parameters in the Krylov-based finite state projection for solving the chemical master equation. Zbl 1411.65070Vo, H. D.; Sidje, R. B. 1 2017 Analysis of inexact Krylov subspace methods for approximating the matrix exponential. Zbl 07313838Dinh, Khanh N.; Sidje, Roger B. 1 2017 An alternating maximization method for approximating the hump of the matrix exponential. Zbl 1378.65097Sadkane, Miloud; Sidje, Roger B. 1 2017 Functionally fitted Runge-Kutta-Nyström methods. Zbl 1359.65114Hoang, N. S.; Sidje, Roger B. 3 2016 Efficient computation of the spectral projections of regular matrix pairs. Zbl 1332.65060Sadkane, Miloud; Sidje, Roger B. 1 2016 Solving the chemical master equation by a fast adaptive finite state projection based on the stochastic simulation algorithm. Zbl 1351.92018Sidje, R. B.; Vo, H. D. 6 2015 On the equivalence of the continuous Adams-Bashforth method and Nordsieck’s technique for changing the step size. Zbl 1308.65120Hoang, N. S.; Sidje, R. B. 1 2013 On the simultaneous tridiagonalization of two symmetric matrices. Zbl 1221.65107Sidje, Roger B. 3 2011 Evaluation of the performance of inexact GMRES. Zbl 1209.65040Sidje, Roger B.; Winkles, Nathan 3 2011 Rational approximation to the Fermi-Dirac function with applications in density functional theory. Zbl 1211.65026Sidje, Roger B.; Saad, Yousef 3 2011 Inexact uniformization and GMRES methods for large Markov chains. Zbl 1265.65011Sidje, R. B. 2 2011 Computing \(exp(-\tau A) b\) with Laguerre polynomials. Zbl 1205.65165Sheehan, Bernard N.; Saad, Yousef; Sidje, Roger B. 4 2010 Functionally fitted explicit pseudo two-step Runge-Kutta methods. Zbl 1158.65050Hoang, Nguyen S.; Sidje, Roger B. 1 2009 Multiscale modeling of chemical kinetics via the master equation. Zbl 1153.60370Macnamara, Shev; Burrage, Kevin; Sidje, Roger B. 28 2008 On the stability of functionally fitted Runge-Kutta methods. Zbl 1143.65066Hoang, Nguyen Si; Sidje, Roger B. 3 2008 Fast generalized cross validation using Krylov subspace methods. Zbl 1157.65012Sidje, Roger B.; Williams, Alan B.; Burrage, Kevin 3 2008 Analysis of trigonometric implicit Runge-Kutta methods. Zbl 1106.65063Nguyen, Hoang Si; Sidje, Roger B.; Cong, Nguyen Huu 25 2007 Inexact uniformization method for computing transient distributions of Markov chains. Zbl 1154.65300Sidje, Roger B.; Burrage, Kevin; Macnamara, Shev 15 2007 An improved finite state projection algorithm for the numerical solution of the chemical master equation with applications. Zbl 1334.92475MacNamara, Shev F.; Burrage, Kevin; Sidje, Roger B. 2 2007 On the stability function of functionally fitted Runge-Kutta methods. Zbl 1337.65078Sidje, Roger B.; Hoang, Nguyen S. 1 2007 On functionally-fitted Runge-Kutta methods. Zbl 1108.65076Hoang, Nguyen Si; Sidje, Roger B.; Cong, Nguyen Huu 12 2006 QRT: A QR-based tridiagonalization algorithm for nonsymmetric matrices. Zbl 1081.65040Sidje, Roger B.; Burrage, K. 2 2005 A numerical study of large sparse matrix exponentials arising in Markov chains. Zbl 1042.65508Sidje, Roger B.; Stewart, William J. 18 1999 Implementation of a variable block Davidson method with deflation for solving large sparse eigenproblems. Zbl 0940.65039Sadkane, Miloud; Sidje, Roger B. 4 1999 A parallel matrix-free implementation of a Runge-Kutta code. Zbl 1193.65118Burrage, Kevin; Eldershaw, Craig; Sidje, Roger 1 1999 Expokit: A software package for computing matrix exponentials. Zbl 0917.65063Sidje, Roger B. 195 1998 Alternatives for parallel Krylov subspace basis computation. Zbl 0889.65029Sidje, R. B. 2 1997 Transient solutions of Markov processes by Krylov subspaces. Zbl 0862.60056Philippe, Bernard; Sidje, Roger B. 2 1995 all cited Publications top 5 cited Publications all top 5 Cited by 472 Authors 19 Jimenez, Juan Carlos 15 Sidje, Roger B. 12 Carbonell, Felix 12 Jator, Samuel N. 9 Blanes, Sergio 7 Biscay, Rolando J. 7 Ross, Joshua V. 6 Ju, Lili 6 Tambue, Antoine 5 Caliari, Marco 5 Ngwane, Fidele F. 5 Ponsoda, Enrique 5 Reichel, Lothar 5 Tokman, Mayya 4 Bader, Philipp 4 Burrage, Kevin 4 de la Cruz, H. 4 Hoang, Nguyen Si 4 Jódar Sanchez, Lucas Antonio 4 Li, Dongping 4 Lord, Gabriel James 4 MacNamara, Shev F. 4 Martín-Vaquero, Jesús 4 Ozaki, Tohru 4 Sadkane, Miloud 4 Sandu, Adrian 4 Vigo-Aguiar, Jesus 4 Wolf, Verena 4 Wu, Gang 3 Bergamaschi, Luca 3 Botchev, Mike A. 3 Burrage, Pamela M. 3 Calvo, Manuel 3 Casas, Fernando 3 Gaudreault, Stéphane 3 Gunzburger, Max D. 3 Hellander, Andreas 3 Kandolf, Peter 3 Li, Jiyong 3 Lötstedt, Per 3 Montijano, Juan Ignacio 3 Okunuga, Solomon A. 3 Ostermann, Alexander 3 Rainer, Stefan 3 Rández, Luis 3 Saad, Yousef 3 Seydaoğlu, Muaz 3 Van Daele, Marnix 3 Vianello, Marco 3 Wang, Zhu 3 Zhang, Rongpei 2 Acebrón, Juan A. 2 Alvermann, Andreas 2 Bartel, Felix 2 Bertaccini, Daniele 2 Bisetti, Fabrizio 2 Botchev, Mikhail A. 2 Cao, Yang 2 Cao, Youfang 2 Cong, Nguyen Huu 2 Cong, Yuhao 2 Cortés López, Juan Carlos 2 Crawford, Forrest W. 2 de la Cruz Cancino, H. 2 Defez, Emilio 2 Drovandi, Christopher C. 2 Duddu, Ravindra 2 Durastante, Fabio 2 Ehigie, Julius Osato 2 Faddy, Malcolm J. 2 Fehske, Holger 2 Franco, J. Méndez 2 Gao, Huadong 2 Geiger, Sebastian 2 Gottlieb, Sigal 2 Grant, Zachary J. 2 Güttel, Stefan 2 Hegland, Markus 2 Henzinger, Thomas A. 2 Hielscher, Ralf 2 Ho, Lam Si Tung 2 Hoang, Thi-Thao-Phuong 2 House, Thomas 2 Ibáñez González, Jacinto Javier 2 Isherwood, Leah 2 Iturria-Medina, Yasser 2 Jahnke, Tobias 2 Jawecki, Tobias 2 Jørgensen, Palle E. T. 2 Li, Xiao 2 Liang, Jie 2 Michels, Dominik Ludewig 2 Narayanamurthi, Mahesh 2 Navarro, Enrique A. 2 Oseledets, Ivan V. 2 Pettitt, Anthony N. 2 Pieper, Konstantin 2 Pollett, Philip K. 2 Pudykiewicz, Janusz A. 2 Rainwater, Greg ...and 372 more Authors all top 5 Cited in 102 Serials 30 Journal of Computational and Applied Mathematics 29 Journal of Computational Physics 18 Numerical Algorithms 17 Applied Mathematics and Computation 16 BIT 10 Computers & Mathematics with Applications 10 Applied Numerical Mathematics 8 Journal of Scientific Computing 8 Linear Algebra and its Applications 7 Numerical Linear Algebra with Applications 5 SIAM Journal on Matrix Analysis and Applications 5 SIAM Journal on Scientific Computing 5 Journal of Theoretical Biology 4 Mathematical Biosciences 4 Theoretical Population Biology 4 Applied Mathematics Letters 3 Computer Methods in Applied Mechanics and Engineering 3 Computer Physics Communications 3 Journal of Mathematical Biology 3 Bulletin of Mathematical Biology 3 International Journal for Numerical Methods in Engineering 3 Mathematical and Computer Modelling 3 Computational Statistics 3 Mathematical Problems in Engineering 2 Mathematics and Computers in Simulation 2 Numerische Mathematik 2 SIAM Journal on Numerical Analysis 2 Theoretical Computer Science 2 Queueing Systems 2 European Journal of Applied Mathematics 2 Computational Mathematics and Mathematical Physics 2 International Journal of Computer Mathematics 2 Journal of Mathematical Chemistry 2 Communications in Nonlinear Science and Numerical Simulation 2 Combustion Theory and Modelling 2 International Journal of Differential Equations 2 Afrika Matematika 1 Computers and Fluids 1 International Journal of Control 1 International Journal for Numerical Methods in Fluids 1 International Journal of Solids and Structures 1 Inverse Problems 1 Journal of Fluid Mechanics 1 Physics Reports 1 Mathematics of Computation 1 Biometrics 1 Calcolo 1 Computing 1 Journal of Applied Probability 1 Journal of Approximation Theory 1 Journal of Econometrics 1 Journal of Optimization Theory and Applications 1 Numerical Functional Analysis and Optimization 1 Systems & Control Letters 1 Journal of the Nigerian Mathematical Society 1 ACM Transactions on Graphics 1 Journal of Theoretical Probability 1 Neural Computation 1 The Annals of Applied Probability 1 Journal of Global Optimization 1 Applied Mathematical Modelling 1 Communications in Statistics. Simulation and Computation 1 Communications in Statistics. Theory and Methods 1 European Journal of Operational Research 1 Pattern Recognition 1 SIAM Journal on Applied Mathematics 1 SIAM Review 1 Computational Statistics and Data Analysis 1 Applied and Computational Harmonic Analysis 1 Computational and Applied Mathematics 1 Advances in Computational Mathematics 1 Finance and Stochastics 1 Optimization Methods & Software 1 ZAMM. Zeitschrift für Angewandte Mathematik und Mechanik 1 Journal of the Royal Statistical Society. Series C. Applied Statistics 1 Proceedings of the Royal Society of London. Series A. Mathematical, Physical and Engineering Sciences 1 International Journal of Numerical Modelling 1 New Journal of Physics 1 European Journal of Mechanics. B. Fluids 1 Computational Geosciences 1 Methodology and Computing in Applied Probability 1 Scandinavian Actuarial Journal 1 Mathematical Modelling and Analysis 1 Journal of Applied Mathematics 1 Stochastic Models 1 Multiscale Modeling & Simulation 1 Internet Mathematics 1 Review of Derivatives Research 1 International Journal of Computational Methods 1 Advances in Difference Equations 1 Mathematical Biosciences and Engineering 1 GAMM-Mitteilungen 1 Communications in Computational Physics 1 Networks and Heterogeneous Media 1 The Annals of Applied Statistics 1 Discrete and Continuous Dynamical Systems. Series S 1 Statistics and Computing 1 Journal of Applied Analysis and Computation 1 Axioms 1 Bayesian Analysis ...and 2 more Serials all top 5 Cited in 33 Fields 224 Numerical analysis (65-XX) 61 Probability theory and stochastic processes (60-XX) 56 Ordinary differential equations (34-XX) 44 Biology and other natural sciences (92-XX) 35 Partial differential equations (35-XX) 29 Linear and multilinear algebra; matrix theory (15-XX) 21 Fluid mechanics (76-XX) 17 Statistics (62-XX) 9 Computer science (68-XX) 9 Quantum theory (81-XX) 8 Game theory, economics, finance, and other social and behavioral sciences (91-XX) 6 Dynamical systems and ergodic theory (37-XX) 6 Approximations and expansions (41-XX) 6 Mechanics of deformable solids (74-XX) 6 Classical thermodynamics, heat transfer (80-XX) 6 Geophysics (86-XX) 5 Optics, electromagnetic theory (78-XX) 5 Statistical mechanics, structure of matter (82-XX) 5 Operations research, mathematical programming (90-XX) 4 Calculus of variations and optimal control; optimization (49-XX) 4 Systems theory; control (93-XX) 3 Combinatorics (05-XX) 3 Operator theory (47-XX) 2 Harmonic analysis on Euclidean spaces (42-XX) 2 Functional analysis (46-XX) 2 Information and communication theory, circuits (94-XX) 1 Nonassociative rings and algebras (17-XX) 1 Topological groups, Lie groups (22-XX) 1 Potential theory (31-XX) 1 Special functions (33-XX) 1 Integral transforms, operational calculus (44-XX) 1 Global analysis, analysis on manifolds (58-XX) 1 Mechanics of particles and systems (70-XX) Citations by Year