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Atzberger, Paul J.

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Author ID: atzberger.paul-j Recent zbMATH articles by "Atzberger, Paul J."
Published as: Atzberger, P. J.; Atzberger, Paul J.
External Links: MGP · ORCID · dblp
Documents Indexed: 21 Publications since 2006

Publications by Year

Citations contained in zbMATH Open

20 Publications have been cited 138 times in 79 Documents Cited by Year
A stochastic immersed boundary method for fluid-structure dynamics at microscopic length scales. Zbl 1124.74052
Atzberger, Paul J.; Kramer, Peter R.; Peskin, Charles S.
36
2007
Stochastic Eulerian Lagrangian methods for fluid-structure interactions with thermal fluctuations. Zbl 1316.76086
Atzberger, Paul J.
16
2011
Spatially adaptive stochastic numerical methods for intrinsic fluctuations in reaction-diffusion systems. Zbl 1187.65004
Atzberger, Paul J.
8
2010
A Brownian dynamics model of kinesin in three dimensions incorporating the force-extension profile of the coiled-coil cargo tether. Zbl 1334.92128
Atzberger, Paul J.; Peskin, Charles S.
8
2006
Simulation of osmotic swelling by the stochastic immersed boundary method. Zbl 1331.82056
Wu, Chen-Hung; Fai, Thomas G.; Atzberger, Paul J.; Peskin, Charles S.
7
2015
On the foundations of the stochastic immersed boundary method. Zbl 1158.76420
Kramer, Peter R.; Peskin, Charles S.; Atzberger, Paul J.
7
2008
Velocity correlations of a thermally fluctuating Brownian particle: a novel model of the hydrodynamic coupling. Zbl 1234.74023
Atzberger, Paul J.
7
2006
Hydrodynamic flows on curved surfaces: spectral numerical methods for radial manifold shapes. Zbl 1415.76489
Gross, B. J.; Atzberger, P. J.
6
2018
Stochastic reductions for inertial fluid-structure interactions subject to thermal fluctuations. Zbl 1342.60109
Tabak, Gil; Atzberger, Paul J.
6
2015
A first-passage kinetic Monte Carlo method for reaction-drift-diffusion processes. Zbl 1349.82047
Mauro, Ava J.; Sigurdsson, Jon Karl; Shrake, Justin; Atzberger, Paul J.; Isaacson, Samuel A.
6
2014
Error analysis of a stochastic immersed boundary method incorporating thermal fluctuations. Zbl 1159.65006
Atzberger, Paul J.; Kramer, Peter R.
6
2008
A note on the correspondence of an immersed boundary method incorporating thermal fluctuations with Stokesian-Brownian dynamics. Zbl 1125.76057
Atzberger, Paul J.
6
2007
A microfluidic pumping mechanism driven by non-equilibrium osmotic effects. Zbl 1167.76367
Atzberger, Paul J.; Isaacson, Samuel; Peskin, Charles S.
5
2009
Spatially adaptive stochastic methods for fluid-structure interactions subject to thermal fluctuations in domains with complex geometries. Zbl 1349.76252
Plunkett, Pat; Hu, Jonathan; Siefert, Christopher; Atzberger, Paul J.
4
2014
Incorporating shear into stochastic Eulerian-Lagrangian methods for rheological studies of complex fluids and soft materials. Zbl 1302.76145
Atzberger, Paul J.
3
2013
Hybrid continuum-particle method for fluctuating lipid bilayer membranes with diffusing protein inclusions. Zbl 1349.92057
Sigurdsson, Jon K.; Brown, Frank L. H.; Atzberger, Paul J.
2
2013
Stochastic reduction method for biological chemical kinetics using time-scale separation. Zbl 1405.92121
Pahlajani, Chetan D.; Atzberger, Paul J.; Khammash, Mustafa
2
2011
Meshfree methods on manifolds for hydrodynamic flows on curved surfaces: a generalized moving least-squares (GMLS) approach. Zbl 1435.76059
Gross, B. J.; Trask, N.; Kuberry, P.; Atzberger, P. J.
1
2020
Spectral numerical exterior calculus methods for differential equations on radial manifolds. Zbl 1404.65225
Gross, B.; Atzberger, P. J.
1
2018
Fluctuating hydrodynamics methods for dynamic coarse-grained implicit-solvent simulations in LAMMPS. Zbl 1364.65172
Wang, Y.; Sigurdsson, J. K.; Atzberger, P. J.
1
2016
Meshfree methods on manifolds for hydrodynamic flows on curved surfaces: a generalized moving least-squares (GMLS) approach. Zbl 1435.76059
Gross, B. J.; Trask, N.; Kuberry, P.; Atzberger, P. J.
1
2020
Hydrodynamic flows on curved surfaces: spectral numerical methods for radial manifold shapes. Zbl 1415.76489
Gross, B. J.; Atzberger, P. J.
6
2018
Spectral numerical exterior calculus methods for differential equations on radial manifolds. Zbl 1404.65225
Gross, B.; Atzberger, P. J.
1
2018
Fluctuating hydrodynamics methods for dynamic coarse-grained implicit-solvent simulations in LAMMPS. Zbl 1364.65172
Wang, Y.; Sigurdsson, J. K.; Atzberger, P. J.
1
2016
Simulation of osmotic swelling by the stochastic immersed boundary method. Zbl 1331.82056
Wu, Chen-Hung; Fai, Thomas G.; Atzberger, Paul J.; Peskin, Charles S.
7
2015
Stochastic reductions for inertial fluid-structure interactions subject to thermal fluctuations. Zbl 1342.60109
Tabak, Gil; Atzberger, Paul J.
6
2015
A first-passage kinetic Monte Carlo method for reaction-drift-diffusion processes. Zbl 1349.82047
Mauro, Ava J.; Sigurdsson, Jon Karl; Shrake, Justin; Atzberger, Paul J.; Isaacson, Samuel A.
6
2014
Spatially adaptive stochastic methods for fluid-structure interactions subject to thermal fluctuations in domains with complex geometries. Zbl 1349.76252
Plunkett, Pat; Hu, Jonathan; Siefert, Christopher; Atzberger, Paul J.
4
2014
Incorporating shear into stochastic Eulerian-Lagrangian methods for rheological studies of complex fluids and soft materials. Zbl 1302.76145
Atzberger, Paul J.
3
2013
Hybrid continuum-particle method for fluctuating lipid bilayer membranes with diffusing protein inclusions. Zbl 1349.92057
Sigurdsson, Jon K.; Brown, Frank L. H.; Atzberger, Paul J.
2
2013
Stochastic Eulerian Lagrangian methods for fluid-structure interactions with thermal fluctuations. Zbl 1316.76086
Atzberger, Paul J.
16
2011
Stochastic reduction method for biological chemical kinetics using time-scale separation. Zbl 1405.92121
Pahlajani, Chetan D.; Atzberger, Paul J.; Khammash, Mustafa
2
2011
Spatially adaptive stochastic numerical methods for intrinsic fluctuations in reaction-diffusion systems. Zbl 1187.65004
Atzberger, Paul J.
8
2010
A microfluidic pumping mechanism driven by non-equilibrium osmotic effects. Zbl 1167.76367
Atzberger, Paul J.; Isaacson, Samuel; Peskin, Charles S.
5
2009
On the foundations of the stochastic immersed boundary method. Zbl 1158.76420
Kramer, Peter R.; Peskin, Charles S.; Atzberger, Paul J.
7
2008
Error analysis of a stochastic immersed boundary method incorporating thermal fluctuations. Zbl 1159.65006
Atzberger, Paul J.; Kramer, Peter R.
6
2008
A stochastic immersed boundary method for fluid-structure dynamics at microscopic length scales. Zbl 1124.74052
Atzberger, Paul J.; Kramer, Peter R.; Peskin, Charles S.
36
2007
A note on the correspondence of an immersed boundary method incorporating thermal fluctuations with Stokesian-Brownian dynamics. Zbl 1125.76057
Atzberger, Paul J.
6
2007
A Brownian dynamics model of kinesin in three dimensions incorporating the force-extension profile of the coiled-coil cargo tether. Zbl 1334.92128
Atzberger, Paul J.; Peskin, Charles S.
8
2006
Velocity correlations of a thermally fluctuating Brownian particle: a novel model of the hydrodynamic coupling. Zbl 1234.74023
Atzberger, Paul J.
7
2006
all top 5

Cited by 165 Authors

18 Atzberger, Paul J.
6 Peskin, Charles S.
4 Fricks, John
4 Zhu, Luoding
3 Hancock, William O.
3 Isaacson, Samuel A.
3 Kramer, Peter R.
3 Lötstedt, Per
3 Sigurdsson, Jon Karl
2 Allard, Jun
2 Arroyo, Marino
2 Delgado-Buscalioni, Rafael
2 Donev, Aleksandar
2 Du, Qiang
2 Erban, Radek
2 Fai, Thomas G.
2 Griffith, Boyce E.
2 Gross, B. J.
2 Ham, Frank E.
2 Hughes, John T.
2 Iaccarino, Gianluca
2 Kang, Seongwon
2 Lin, Fang Hua
2 Mckinley, Scott A.
2 Mori, Yoichiro
2 Torres-Sánchez, Alejandro
2 Usabiaga, Florencio Balboa
1 Adams, Nikolaus A.
1 Allen, Edward James
1 Ambruş, Victor E.
1 Ayyaswamy, P. S.
1 Azarnykh, Dmitrii
1 Bashardanesh, Zahedeh
1 Bokes, Pavol
1 Bouzarth, Elizabeth L.
1 Bringley, Thomas T.
1 Brown, Frank L. H.
1 Busuioc, Sergiu
1 Casciola, Carlo Massimo
1 Chapman, Stephen Jonathan
1 Chen, Weisheng
1 Das, Sovan Lal
1 D’Avino, Gaetano
1 De Corato, M.
1 Devroye, Luc P. J. A.
1 Didier, Gustavo
1 Dogan, Elife
1 Doumic, Marie
1 Eckmann, David M.
1 Eisenberg, Robert S.
1 Elf, Johan
1 Epureanu, Bogdan I.
1 Evans, James Arthur
1 Fang, Shiaofen
1 Foster, John T. jun.
1 Fujita, Masahiro
1 Gallo, Mirko
1 Martínez Gamba, Irene
1 Grima, Ramon
1 Hao, Jian
1 Hardt, Steffen
1 Harmon, Michael
1 Harry, Dennis L.
1 He, Guowei
1 Hellander, Stefan
1 Hill, David B.
1 Ho-huu, Vinh
1 Hohenegger, Christel
1 Hu, Jonathan J.
1 Hu, Wei-Fan
1 Hughes, John Forbes
1 Hulsen, Martien A.
1 Hutter, Marcus
1 Huynh, P. D.
1 Kang, Hye-Won
1 Kassen, Andrew T.
1 Keaveny, Eric E.
1 Khammash, Mustafa H.
1 Kim, Yongsam
1 King, John Robert
1 Klar, Axel
1 Koike, Osamu
1 Kopacz, Adrian Marcin
1 Krishnan, Arjun
1 Kuberry, Paul Allen
1 Kusumaatmaja, Halim
1 Lai, Mingchih
1 Le-Quoc, C.
1 Le, Linh A.
1 Lee, Pilhwa
1 Li, Manlin
1 Li, Zhang
1 Litvinov, Sergey
1 Liu, Chun
1 Liu, Jiangguo
1 Liu, Jiehan
1 Liu, Kai
1 Liu, Qianlong
1 Liu, Wing Kam
1 Loose, Matthew
...and 65 more Authors

Citations by Year