Shen, Yinan; Tang, Jijun; Guo, Fei Identification of protein subcellular localization via integrating evolutionary and physicochemical information into Chou’s general PseAAC. (English) Zbl 1406.92212 J. Theor. Biol. 462, 230-239 (2019). MSC: 92C40 68T05 92C37 PDFBibTeX XMLCite \textit{Y. Shen} et al., J. Theor. Biol. 462, 230--239 (2019; Zbl 1406.92212) Full Text: DOI
Sabooh, M. Fazli; Iqbal, Nadeem; Khan, Mukhtaj; Khan, Muslim; Maqbool, H. F. Identifying 5-methylcytosine sites in RNA sequence using composite encoding feature into Chou’s PseKNC. (English) Zbl 1397.92232 J. Theor. Biol. 452, 1-9 (2018). MSC: 92C40 PDFBibTeX XMLCite \textit{M. F. Sabooh} et al., J. Theor. Biol. 452, 1--9 (2018; Zbl 1397.92232) Full Text: DOI
Tarafder, Sumit; Toukir Ahmed, Md.; Iqbal, Sumaiya; Tamjidul Hoque, Md; Sohel Rahman, M. RBSURFpred: modeling protein accessible surface area in real and binary space using regularized and optimized regression. (English) Zbl 1397.92542 J. Theor. Biol. 441, 44-57 (2018). MSC: 92D20 92C40 62P10 PDFBibTeX XMLCite \textit{S. Tarafder} et al., J. Theor. Biol. 441, 44--57 (2018; Zbl 1397.92542) Full Text: DOI
Georgiou, D. N.; Karakasidis, T. E.; Megaritis, A. C.; Nieto, Juan J.; Torres, A. An extension of fuzzy topological approach for comparison of genetic sequences. (English) Zbl 1361.92055 J. Intell. Fuzzy Syst. 29, No. 5, 2259-2269 (2015). MSC: 92D20 92C40 PDFBibTeX XMLCite \textit{D. N. Georgiou} et al., J. Intell. Fuzzy Syst. 29, No. 5, 2259--2269 (2015; Zbl 1361.92055) Full Text: DOI
Wan, Shibiao; Mak, Man-Wai; Kung, Sun-Yuan mLASSO-Hum: a LASSO-based interpretable human-protein subcellular localization predictor. (English) Zbl 1343.92176 J. Theor. Biol. 382, 223-234 (2015). MSC: 92C40 92C37 PDFBibTeX XMLCite \textit{S. Wan} et al., J. Theor. Biol. 382, 223--234 (2015; Zbl 1343.92176) Full Text: DOI
Yang, Lei; Lv, Yingli; Li, Tao; Zuo, Yongchun; Jiang, Wei Human proteins characterization with subcellular localizations. (English) Zbl 1412.92111 J. Theor. Biol. 358, 61-73 (2014). MSC: 92C40 92C37 PDFBibTeX XMLCite \textit{L. Yang} et al., J. Theor. Biol. 358, 61--73 (2014; Zbl 1412.92111) Full Text: DOI
Huang, Chao; Yuan, Jing-Qi Predicting protein subchloroplast locations with both single and multiple sites via three different modes of Chou’s pseudo amino acid compositions. (English) Zbl 1397.92195 J. Theor. Biol. 335, 205-212 (2013). MSC: 92C40 92C37 PDFBibTeX XMLCite \textit{C. Huang} and \textit{J.-Q. Yuan}, J. Theor. Biol. 335, 205--212 (2013; Zbl 1397.92195) Full Text: DOI
Fan, Guo-Liang; Li, Qian-Zhong Predicting mycobacterial proteins subcellular locations by incorporating pseudo-average chemical shift into the general form of Chou’s pseudo amino acid composition. (English) Zbl 1397.92186 J. Theor. Biol. 304, 88-95 (2012). MSC: 92C40 92C37 68T05 62P10 PDFBibTeX XMLCite \textit{G.-L. Fan} and \textit{Q.-Z. Li}, J. Theor. Biol. 304, 88--95 (2012; Zbl 1397.92186) Full Text: DOI
Qiu, Zhijun; Wang, Xicheng Prediction of protein-protein interaction sites using patch-based residue characterization. (English) Zbl 1307.92088 J. Theor. Biol. 293, 143-150 (2012). MSC: 92C40 PDFBibTeX XMLCite \textit{Z. Qiu} and \textit{X. Wang}, J. Theor. Biol. 293, 143--150 (2012; Zbl 1307.92088) Full Text: DOI
Mei, Suyu Multi-kernel transfer learning based on Chou’s PseAAC formulation for protein submitochondria localization. (English) Zbl 1307.92085 J. Theor. Biol. 293, 121-130 (2012); corrigendum ibid. 338, 112 (2013). MSC: 92C40 92D20 68T05 PDFBibTeX XMLCite \textit{S. Mei}, J. Theor. Biol. 293, 121--130 (2012; Zbl 1307.92085) Full Text: DOI
Kavousi, Kaveh; Moshiri, Behzad; Sadeghi, Mehdi; Araabi, Babak N.; Moosavi-Movahedi, Ali Akbar A protein fold classifier formed by fusing different modes of pseudo amino acid composition via PSSM. (English) Zbl 1403.92209 Comput. Biol. Chem. 35, No. 1, 1-9 (2011). MSC: 92D20 92C40 PDFBibTeX XMLCite \textit{K. Kavousi} et al., Comput. Biol. Chem. 35, No. 1, 1--9 (2011; Zbl 1403.92209) Full Text: DOI
Xiao, Xuan; Wu, Zhi-Cheng; Chou, Kuo-Chen iLoc-Virus: a multi-label learning classifier for identifying the subcellular localization of virus proteins with both single and multiple sites. (English) Zbl 1397.92238 J. Theor. Biol. 284, 42-51 (2011). MSC: 92C40 92C37 68T05 92-08 PDFBibTeX XMLCite \textit{X. Xiao} et al., J. Theor. Biol. 284, 42--51 (2011; Zbl 1397.92238) Full Text: DOI
Zhang, Ya-Nan; Pan, Xiao-Yong; Huang, Yan; Shen, Hong-Bin Adaptive compressive learning for prediction of protein-protein interactions from primary sequence. (English) Zbl 1397.92243 J. Theor. Biol. 283, 44-52 (2011). MSC: 92C40 92D20 PDFBibTeX XMLCite \textit{Y.-N. Zhang} et al., J. Theor. Biol. 283, 44--52 (2011; Zbl 1397.92243) Full Text: DOI
Mohabatkar, Hassan; Mohammad Beigi, Majid; Esmaeili, Abolghasem Prediction of GABA\(_{\mathrm A}\) receptor proteins using the concept of Chou’s pseudo-amino acid composition and support vector machine. (English) Zbl 1397.92215 J. Theor. Biol. 281, 18-23 (2011). MSC: 92C40 92D20 68T05 PDFBibTeX XMLCite \textit{H. Mohabatkar} et al., J. Theor. Biol. 281, 18--23 (2011; Zbl 1397.92215) Full Text: DOI
Lin, Hao; Ding, Hui Predicting ion channels and their types by the dipeptide mode of pseudo amino acid composition. (English) Zbl 1307.92080 J. Theor. Biol. 269, 64-69 (2011). MSC: 92C40 68T05 62J10 PDFBibTeX XMLCite \textit{H. Lin} and \textit{H. Ding}, J. Theor. Biol. 269, 64--69 (2011; Zbl 1307.92080) Full Text: DOI
Khan, Asifullah; Majid, Abdul; Hayat, Maqsood CE-PLoc: An ensemble classifier for predicting protein subcellular locations by fusing different modes of pseudo amino acid composition. (English) Zbl 1226.92020 Comput. Biol. Chem. 35, No. 4, 218-229 (2011). MSC: 92C40 92-08 92C37 65C20 PDFBibTeX XMLCite \textit{A. Khan} et al., Comput. Biol. Chem. 35, No. 4, 218--229 (2011; Zbl 1226.92020) Full Text: DOI
Yu, Lezheng; Guo, Yanzhi; Li, Yizhou; Li, Gongbing; Li, Menglong; Luo, Jiesi; Xiong, Wenjia; Qin, Wenli SecretP: identifying bacterial secreted proteins by fusing new features into Chou’s pseudo-amino acid composition. (English) Zbl 1410.92040 J. Theor. Biol. 267, No. 1, 1-6 (2010). MSC: 92C40 62P10 92C37 68T05 PDFBibTeX XMLCite \textit{L. Yu} et al., J. Theor. Biol. 267, No. 1, 1--6 (2010; Zbl 1410.92040) Full Text: DOI
Shen, Hong-Bin; Chou, Kuo-Chen Gneg-mPLoc: a top-down strategy to enhance the quality of predicting subcellular localization of Gram-negative bacterial proteins. (English) Zbl 1406.92211 J. Theor. Biol. 264, No. 2, 326-333 (2010). MSC: 92C40 92C37 62P10 PDFBibTeX XMLCite \textit{H.-B. Shen} and \textit{K.-C. Chou}, J. Theor. Biol. 264, No. 2, 326--333 (2010; Zbl 1406.92211) Full Text: DOI
Huang, Chen; Zhang, Ruijie; Chen, Zhiqiang; Jiang, Yongshuai; Shang, Zhenwei; Sun, Peng; Zhang, Xuehong; Li, Xia Predict potential drug targets from the ion channel proteins based on SVM. (English) Zbl 1403.92205 J. Theor. Biol. 262, No. 4, 750-756 (2010). MSC: 92D20 92C40 68T05 PDFBibTeX XMLCite \textit{C. Huang} et al., J. Theor. Biol. 262, No. 4, 750--756 (2010; Zbl 1403.92205) Full Text: DOI
Du, Pufeng; Cao, Shengjiao; Li, Yanda SubChlo: predicting protein subchloroplast locations with pseudo-amino acid composition and the evidence-theoretic \(K\)-nearest neighbor (ET-KNN) algorithm. (English) Zbl 1403.92063 J. Theor. Biol. 261, No. 2, 330-335 (2009). MSC: 92C40 92C80 68W05 PDFBibTeX XMLCite \textit{P. Du} et al., J. Theor. Biol. 261, No. 2, 330--335 (2009; Zbl 1403.92063) Full Text: DOI
Lin, Hao The modified Mahalanobis discriminant for predicting outer membrane proteins by using Chou’s pseudo amino acid composition. (English) Zbl 1398.92076 J. Theor. Biol. 252, No. 2, 350-356 (2008). MSC: 92C40 92C37 62P10 PDFBibTeX XMLCite \textit{H. Lin}, J. Theor. Biol. 252, No. 2, 350--356 (2008; Zbl 1398.92076) Full Text: DOI